Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.32□□□□□ -1.24
SCN2BO60939 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 MAML3-201ENST00000398940 831 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 HIST1H2BPS2-201ENST00000402707 340 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 RAET1K-201ENST00000403651 784 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 HSD3BP5-201ENST00000434856 1132 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC7.32□□□□□ -1.24
SCN2BO60939 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.32□□□□□ -1.24
SCN2BO60939 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SCN2BO60939 AP1B1P1-202ENST00000448124 191 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC7.32□□□□□ -1.24
SCN2BO60939 FGF12-206ENST00000450716 768 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 AL355076.1-201ENST00000484315 270 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 RN7SL434P-201ENST00000495872 271 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 RN7SL792P-201ENST00000496286 305 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 RPL7AP2-201ENST00000496515 740 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC7.32□□□□□ -1.24
SCN2BO60939 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.32□□□□□ -1.24
SCN2BO60939 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.32□□□□□ -1.24
SCN2BO60939 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.32□□□□□ -1.24
SCN2BO60939 RN7SL123P-201ENST00000577239 292 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC7.32□□□□□ -1.24
SCN2BO60939 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.32□□□□□ -1.24
SCN2BO60939 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.32□□□□□ -1.24
SCN2BO60939 AC130456.6-201ENST00000623745 765 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.32□□□□□ -1.24
SCN2BO60939 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 AL139805.2-201ENST00000455305 2433 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 AC125603.4-201ENST00000621942 2699 ntBASIC7.32□□□□□ -1.24
SCN2BO60939 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SCN2BO60939 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.31□□□□□ -1.24
SCN2BO60939 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.31□□□□□ -1.24
SCN2BO60939 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.31□□□□□ -1.24
SCN2BO60939 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 VDAC1P2-201ENST00000423609 850 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.31□□□□□ -1.24
SCN2BO60939 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 ANKRD54P1-201ENST00000433115 471 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 AL122003.1-201ENST00000435206 784 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC7.31□□□□□ -1.24
SCN2BO60939 RN7SL569P-201ENST00000494652 288 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC7.31□□□□□ -1.24
SCN2BO60939 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 AC005230.1-201ENST00000555418 285 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 AC024270.1-201ENST00000559181 404 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN2BO60939 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 AC087645.1-201ENST00000588528 291 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.31□□□□□ -1.24
SCN2BO60939 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.31□□□□□ -1.24
SCN2BO60939 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.31□□□□□ -1.24
SCN2BO60939 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN2BO60939 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 AC009166.2-201ENST00000624410 2833 ntBASIC7.31□□□□□ -1.24
SCN2BO60939 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN2BO60939 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SCN2BO60939 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCN2BO60939 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
SCN2BO60939 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms