Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AL358942.1-201ENST00000418595 1178 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 MED28P8-201ENST00000454831 521 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 RN7SL706P-201ENST00000460079 292 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 RPL7AP56-201ENST00000476420 791 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC127024.1-201ENST00000490847 418 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 GAPDHP38-201ENST00000503632 1002 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC090835.1-201ENST00000515189 1024 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 IGHVIV-44-1-201ENST00000519334 338 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 MIR4262-201ENST00000578394 54 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC004918.3-201ENST00000602609 925 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 BNIP3P35-201ENST00000604530 490 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AL021368.1-201ENST00000607490 540 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC239600.2-201ENST00000619615 1165 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 OR6M2P-202ENST00000641780 2063 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC02128-205ENST00000641755 1334 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 PARP1P1-201ENST00000413631 3026 ntBASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP1Q96SZ6 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 SYT14P1-202ENST00000600441 1448 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC087501.5-201ENST00000607496 2374 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC009148.1-201ENST00000570148 2693 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC117382.2-201ENST00000564748 3151 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 RNA5SP463-201ENST00000363030 120 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 RN7SKP208-201ENST00000365474 361 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 SNORA10-201ENST00000384084 133 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 MIR128-2-201ENST00000384893 84 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CRIP1P3-201ENST00000416794 220 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 RPE-205ENST00000429907 925 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 FO393419.1-201ENST00000443746 355 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 RPL10P6-201ENST00000457497 318 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC114300.1-201ENST00000502347 280 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC114801.1-201ENST00000512633 297 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 RNU6-362P-201ENST00000516736 90 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AP003385.2-201ENST00000524910 973 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC108471.2-205ENST00000529314 628 ntTSL 3 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC092451.2-201ENST00000538746 658 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 TRAV11-201ENST00000539512 339 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC244090.2-201ENST00000567614 792 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms