Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 YAP1P2-201ENST00000455104 610 ntBASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 ADI1P2-201ENST00000514945 429 ntBASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC244131.1-201ENST00000542152 922 ntBASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AL137190.1-201ENST00000603288 282 ntBASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC016394.1-201ENST00000608444 833 ntBASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 AC026333.4-201ENST00000613543 544 ntBASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDK5RAP1Q96SZ6 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 TRAF6P1-201ENST00000429404 1558 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 MARK2P10-201ENST00000454959 1437 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 COX6A1P3-201ENST00000404167 293 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL603650.1-201ENST00000412680 240 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC011753.4-201ENST00000417974 311 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 TPTE2P1-204ENST00000435256 593 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL606752.1-201ENST00000435442 666 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL512637.1-201ENST00000439523 1231 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 RN7SL124P-201ENST00000498656 285 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 CASC8-201ENST00000501396 930 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC137549.1-201ENST00000514243 533 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 CLIC4P2-201ENST00000601934 717 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC005972.3-201ENST00000606304 481 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL021807.1-201ENST00000607175 565 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC090506.2-201ENST00000624521 419 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AC087203.2-201ENST00000526502 1587 ntBASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDK5RAP1Q96SZ6 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDK5RAP1Q96SZ6 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms