Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AL080312.1-201ENST00000256654 824 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 VN1R66P-201ENST00000412929 916 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 KIF4CP-201ENST00000422742 1279 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 GAPDHP55-201ENST00000423136 803 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 FABP5P10-201ENST00000435729 408 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 FDPSP8-201ENST00000438304 1089 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AP002383.1-201ENST00000439405 720 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 PSPC1P1-201ENST00000442352 665 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 SEPT7P6-201ENST00000469999 1143 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 DEFB109A-201ENST00000482450 265 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AC116353.1-201ENST00000489727 316 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 TPK1-214ENST00000639328 826 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AL162632.3-201ENST00000566976 1625 ntBASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FNDC3BQ53EP0 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 VTRNA1-2-201ENST00000365241 89 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 MIR7-1-201ENST00000384871 110 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 MIR128-2-201ENST00000384893 84 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 BECN1P2-201ENST00000407947 812 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 RN7SKP26-201ENST00000410247 293 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 RN7SKP139-201ENST00000410411 293 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC005099.1-201ENST00000442083 610 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ELOBP1-201ENST00000447693 357 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 RN7SL740P-201ENST00000467060 344 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC092905.1-201ENST00000467527 949 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 SNRPD2P1-201ENST00000489253 354 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ADI1P2-201ENST00000514945 429 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 LINC00557-201ENST00000563184 1279 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 RPL23AP90-201ENST00000603820 236 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 MIR6736-201ENST00000616799 59 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC005790.1-201ENST00000619774 450 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AL589666.2-201ENST00000624603 618 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC117382.2-201ENST00000564748 3151 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 OR7E25P-202ENST00000641088 5937 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms