Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AKIRIN1P1-201ENST00000547384 544 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC135626.1-201ENST00000556983 435 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC124283.4-201ENST00000581815 456 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 BNIP3P36-201ENST00000603076 574 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC009237.13-201ENST00000603193 276 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 OR2BH1P-201ENST00000608850 864 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 ATF3-210ENST00000613104 581 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC143336.1-201ENST00000614164 836 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC005790.1-201ENST00000619774 450 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 ALG13-226ENST00000622986 582 ntTSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC019278.1-201ENST00000623516 479 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 SAMMSON-209ENST00000641222 1100 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 EEF1A1P15-201ENST00000395772 1408 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 LIMD1-AS1-201ENST00000427644 1536 ntTSL 3 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 COL17A1-203ENST00000393211 1610 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 PPHLN1-224ENST00000613154 1863 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 TROVE2-202ENST00000367443 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 ANKRD1-201ENST00000371697 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AL353770.3-201ENST00000616253 1988 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 CTSE-201ENST00000358184 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC005358.2-201ENST00000584772 3679 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 KIF18B-202ENST00000587309 4217 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 PRUNE1-203ENST00000368935 2238 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC100827.3-201ENST00000566291 2155 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AJ003147.3-201ENST00000622989 2199 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 TMEM254-205ENST00000372281 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC005524.1-201ENST00000636857 1674 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 PCSK2-201ENST00000262545 4740 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 API5P1-201ENST00000424316 1510 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 MTND5P12-201ENST00000502851 1449 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 ZNF675-209ENST00000601935 1444 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 FBXL7-201ENST00000329673 3960 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 RPL4P3-201ENST00000428881 1311 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 SLC9B1P3-201ENST00000452667 1334 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 RNU1-34P-201ENST00000364421 157 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 RNA5SP355-201ENST00000365317 135 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 Y_RNA.472-201ENST00000384322 102 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 AL356057.2-201ENST00000403318 432 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 RNA5SP304-201ENST00000411199 104 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AL645937.5-202ENST00000415595 944 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 RPSAP59-201ENST00000421048 890 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC004074.1-201ENST00000421810 1063 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 RBMY2JP-201ENST00000425544 1059 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 KCTD9P1-201ENST00000430462 1167 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AL109810.1-201ENST00000435008 495 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC136896.1-201ENST00000438334 547 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 SNX18P2-201ENST00000438540 808 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 LINC00888-204ENST00000487386 421 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 CUTA-213ENST00000494751 731 ntTSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC114812.3-201ENST00000509542 730 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC024589.1-201ENST00000512207 263 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 NPM1P6-201ENST00000521088 871 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 HIGD1AP10-201ENST00000527837 282 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 FDPSP4-201ENST00000534629 1049 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms