Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 AC007322.3-201ENST00000426526 701 ntBASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 DUX4L16-201ENST00000555130 1264 ntBASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB3Q9Y5G1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB3Q9Y5G1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGB3Q9Y5G1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGB3Q9Y5G1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB3Q9Y5G1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB3Q9Y5G1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB3Q9Y5G1 AC112907.3-201ENST00000577781 2400 ntBASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 AC091799.1-201ENST00000422823 811 ntBASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 AC099778.1-201ENST00000568593 1911 ntBASIC19.08■□□□□ 0.64
PCDHGB3Q9Y5G1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGB3Q9Y5G1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 AC007322.1-201ENST00000426983 750 ntBASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB3Q9Y5G1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms