Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 AP006294.2-201ENST00000641667 209 ntBASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 AC020907.5-201ENST00000624372 1936 ntBASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 AC091874.3-201ENST00000512672 1195 ntBASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 AC007225.1-201ENST00000566331 1836 ntBASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB3Q9Y5E6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB3Q9Y5E6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 DUSP5P2-201ENST00000426873 1033 ntBASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 AC083880.1-201ENST00000608266 535 ntBASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB3Q9Y5E6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 AL391422.3-201ENST00000603791 2761 ntBASIC19.66■□□□□ 0.74
PCDHB3Q9Y5E6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms