Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 AC137761.2-201ENST00000561729 223 ntBASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 AC145350.3-201ENST00000569033 163 ntBASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RHBDD3Q9Y3P4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 AC092720.2-201ENST00000602388 1665 ntBASIC17.61■□□□□ 0.41
RHBDD3Q9Y3P4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 AC007322.3-201ENST00000426526 701 ntBASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 AC010536.3-201ENST00000620306 533 ntBASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RHBDD3Q9Y3P4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDD3Q9Y3P4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RHBDD3Q9Y3P4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDD3Q9Y3P4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RHBDD3Q9Y3P4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RHBDD3Q9Y3P4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
RHBDD3Q9Y3P4 TERF1P5-201ENST00000477545 1207 ntBASIC17.59■□□□□ 0.41
RHBDD3Q9Y3P4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms