Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 BX119927.1-201ENST00000636596 1552 ntBASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 AC005332.7-201ENST00000614046 2005 ntBASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D4Q9Y2X8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 AC010141.2-201ENST00000452426 721 ntBASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 AC091305.1-201ENST00000479476 895 ntBASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 AC106739.1-201ENST00000617035 715 ntBASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 AL355001.2-201ENST00000620617 1191 ntBASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2D4Q9Y2X8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 TNXA-203ENST00000507684 2038 ntBASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 MIR939-201ENST00000401314 82 ntBASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 AC096631.2-201ENST00000436136 790 ntBASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms