Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 KRT18P68-201ENST00000392293 1000 ntBASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 HES2-205ENST00000487437 968 ntTSL 3 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 AC121338.2-201ENST00000622535 1744 ntBASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 AC073314.1-201ENST00000568729 2216 ntBASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZRN3Q9UPQ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 AC211429.1-201ENST00000415277 523 ntBASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 LINC01023-201ENST00000606054 436 ntBASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDZRN3Q9UPQ7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 SNORA78-201ENST00000459373 127 ntBASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 AC069544.1-201ENST00000609399 999 ntBASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PDZRN3Q9UPQ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 MIR1224-201ENST00000408193 85 ntBASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.96■■□□□ 1.75
PDZRN3Q9UPQ7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDZRN3Q9UPQ7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.95■■□□□ 1.75
PDZRN3Q9UPQ7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDZRN3Q9UPQ7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDZRN3Q9UPQ7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDZRN3Q9UPQ7 AP005212.1-201ENST00000581547 1997 ntBASIC25.95■■□□□ 1.75
PDZRN3Q9UPQ7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDZRN3Q9UPQ7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDZRN3Q9UPQ7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDZRN3Q9UPQ7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDZRN3Q9UPQ7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDZRN3Q9UPQ7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms