Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF346Q9UL40 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF346Q9UL40 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF346Q9UL40 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 AC006015.1-201ENST00000429970 570 ntBASIC18.12■□□□□ 0.49
ZNF346Q9UL40 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 CYP21A1P-202ENST00000354927 1481 ntBASIC18.12■□□□□ 0.49
ZNF346Q9UL40 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF346Q9UL40 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 DUX4L16-201ENST00000555130 1264 ntBASIC18.11■□□□□ 0.49
ZNF346Q9UL40 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 AL162412.1-201ENST00000567129 965 ntBASIC18.11■□□□□ 0.49
ZNF346Q9UL40 AL356652.1-201ENST00000615962 565 ntBASIC18.11■□□□□ 0.49
ZNF346Q9UL40 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF346Q9UL40 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 AC087633.2-202ENST00000565166 1439 ntBASIC18.1■□□□□ 0.49
ZNF346Q9UL40 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 AC004911.1-201ENST00000416316 871 ntBASIC18.1■□□□□ 0.49
ZNF346Q9UL40 PGM5P4-201ENST00000421970 445 ntBASIC18.1■□□□□ 0.49
ZNF346Q9UL40 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 AC011767.1-201ENST00000617410 1153 ntBASIC18.1■□□□□ 0.49
ZNF346Q9UL40 AC092437.1-201ENST00000624794 1048 ntBASIC18.1■□□□□ 0.49
ZNF346Q9UL40 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF346Q9UL40 TCF3P1-201ENST00000423021 1937 ntBASIC18.1■□□□□ 0.49
ZNF346Q9UL40 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 BID-214ENST00000617586 542 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF346Q9UL40 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF346Q9UL40 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF346Q9UL40 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms