Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.37■□□□□ 0.85
APPL1Q9UKG1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 AC092118.2-201ENST00000613495 667 ntBASIC20.37■□□□□ 0.85
APPL1Q9UKG1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.36■□□□□ 0.85
APPL1Q9UKG1 AC093787.1-201ENST00000450396 207 ntBASIC20.36■□□□□ 0.85
APPL1Q9UKG1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
APPL1Q9UKG1 AC087633.2-202ENST00000565166 1439 ntBASIC20.36■□□□□ 0.85
APPL1Q9UKG1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
APPL1Q9UKG1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APPL1Q9UKG1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
APPL1Q9UKG1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APPL1Q9UKG1 AC010980.2-201ENST00000587099 1412 ntBASIC20.33■□□□□ 0.84
APPL1Q9UKG1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APPL1Q9UKG1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
APPL1Q9UKG1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
APPL1Q9UKG1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms