Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.71■□□□□ 0.43
COMMD3Q9UBI1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 TMEM179-206ENST00000616017 1645 ntBASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 AC012354.3-201ENST00000623734 483 ntBASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD3Q9UBI1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
COMMD3Q9UBI1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 AC055733.4-201ENST00000638462 1354 ntBASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 AC005082.1-201ENST00000413042 2259 ntBASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 AC007613.1-201ENST00000572811 2597 ntBASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.68■□□□□ 0.42
COMMD3Q9UBI1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms