Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.93■■□□□ 1.26
COL20A1Q9P218 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
COL20A1Q9P218 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
COL20A1Q9P218 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.93■■□□□ 1.26
COL20A1Q9P218 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
COL20A1Q9P218 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
COL20A1Q9P218 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL20A1Q9P218 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL20A1Q9P218 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.92■■□□□ 1.26
COL20A1Q9P218 AC007225.1-201ENST00000566331 1836 ntBASIC22.92■■□□□ 1.26
COL20A1Q9P218 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
COL20A1Q9P218 AC133681.1-201ENST00000465482 601 ntBASIC22.92■■□□□ 1.26
COL20A1Q9P218 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL20A1Q9P218 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
COL20A1Q9P218 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL20A1Q9P218 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.92■■□□□ 1.26
COL20A1Q9P218 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.92■■□□□ 1.26
COL20A1Q9P218 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 AC239809.2-201ENST00000415381 517 ntBASIC22.91■■□□□ 1.26
COL20A1Q9P218 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
COL20A1Q9P218 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.91■■□□□ 1.26
COL20A1Q9P218 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.91■■□□□ 1.26
COL20A1Q9P218 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
COL20A1Q9P218 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.91■■□□□ 1.26
COL20A1Q9P218 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL20A1Q9P218 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL20A1Q9P218 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL20A1Q9P218 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL20A1Q9P218 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL20A1Q9P218 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL20A1Q9P218 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 KRASP1-201ENST00000407852 552 ntBASIC22.9■■□□□ 1.26
COL20A1Q9P218 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL20A1Q9P218 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL20A1Q9P218 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL20A1Q9P218 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.89■■□□□ 1.25
COL20A1Q9P218 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.89■■□□□ 1.25
COL20A1Q9P218 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.89■■□□□ 1.25
COL20A1Q9P218 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.89■■□□□ 1.25
COL20A1Q9P218 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL20A1Q9P218 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
COL20A1Q9P218 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.89■■□□□ 1.25
COL20A1Q9P218 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL20A1Q9P218 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.88■■□□□ 1.25
COL20A1Q9P218 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.88■■□□□ 1.25
COL20A1Q9P218 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.88■■□□□ 1.25
COL20A1Q9P218 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.88■■□□□ 1.25
COL20A1Q9P218 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.88■■□□□ 1.25
COL20A1Q9P218 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.88■■□□□ 1.25
COL20A1Q9P218 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.88■■□□□ 1.25
COL20A1Q9P218 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL20A1Q9P218 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
COL20A1Q9P218 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL20A1Q9P218 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL20A1Q9P218 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.87■■□□□ 1.25
COL20A1Q9P218 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.87■■□□□ 1.25
COL20A1Q9P218 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.87■■□□□ 1.25
COL20A1Q9P218 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL20A1Q9P218 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.87■■□□□ 1.25
COL20A1Q9P218 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL20A1Q9P218 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL20A1Q9P218 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms