Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 RN7SL850P-201ENST00000579959 291 ntBASIC21.49■■□□□ 1.03
TLR9Q9NR96 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TLR9Q9NR96 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TLR9Q9NR96 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 AC124283.5-201ENST00000624661 1809 ntBASIC21.48■■□□□ 1.03
TLR9Q9NR96 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR9Q9NR96 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR9Q9NR96 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.47■■□□□ 1.03
TLR9Q9NR96 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TLR9Q9NR96 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TLR9Q9NR96 AC011484.1-201ENST00000377652 1995 ntBASIC21.47■■□□□ 1.03
TLR9Q9NR96 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR9Q9NR96 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TLR9Q9NR96 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR9Q9NR96 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.47■■□□□ 1.03
TLR9Q9NR96 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.47■■□□□ 1.03
TLR9Q9NR96 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.47■■□□□ 1.03
TLR9Q9NR96 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TLR9Q9NR96 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TLR9Q9NR96 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 AC073195.1-201ENST00000607241 877 ntBASIC21.46■■□□□ 1.03
TLR9Q9NR96 AL121906.2-201ENST00000621597 723 ntBASIC21.46■■□□□ 1.03
TLR9Q9NR96 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.46■■□□□ 1.03
TLR9Q9NR96 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR9Q9NR96 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TLR9Q9NR96 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
TLR9Q9NR96 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TLR9Q9NR96 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TLR9Q9NR96 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR9Q9NR96 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TLR9Q9NR96 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TLR9Q9NR96 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TLR9Q9NR96 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TLR9Q9NR96 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TLR9Q9NR96 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms