Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 KRT18P6-201ENST00000555540 1265 ntBASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.05■□□□□ 0.64
PRDM9Q9NQV7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 LINC01006-201ENST00000333319 2292 ntBASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRDM9Q9NQV7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRDM9Q9NQV7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 CD99P1-205ENST00000527459 561 ntBASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PRDM9Q9NQV7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRDM9Q9NQV7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 RNF165-205ENST00000588679 2904 ntBASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
PRDM9Q9NQV7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms