Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 AC092183.1-201ENST00000469884 875 ntBASIC18.96■□□□□ 0.63
CHD8Q9HCK8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 LINC01124-201ENST00000409786 2117 ntBASIC18.96■□□□□ 0.63
CHD8Q9HCK8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 MIR3652-201ENST00000579335 131 ntBASIC18.96■□□□□ 0.63
CHD8Q9HCK8 DGCR10-201ENST00000609839 495 ntBASIC18.96■□□□□ 0.63
CHD8Q9HCK8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD8Q9HCK8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHD8Q9HCK8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 AC097488.1-201ENST00000507834 756 ntBASIC18.93■□□□□ 0.62
CHD8Q9HCK8 VENTXP5-201ENST00000523979 775 ntBASIC18.93■□□□□ 0.62
CHD8Q9HCK8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD8Q9HCK8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 AC011506.1-201ENST00000474329 610 ntBASIC18.92■□□□□ 0.62
CHD8Q9HCK8 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.92■□□□□ 0.62
CHD8Q9HCK8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.92■□□□□ 0.62
CHD8Q9HCK8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD8Q9HCK8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms