Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC40Q9H9A6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC40Q9H9A6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
LRRC40Q9H9A6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.45■□□□□ 0.87
LRRC40Q9H9A6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 MIR935-201ENST00000401179 91 ntBASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 AC105020.6-201ENST00000621523 1217 ntBASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 OR10C1-204ENST00000622521 1039 ntBASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.45■□□□□ 0.86
LRRC40Q9H9A6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 KRT18P68-201ENST00000392293 1000 ntBASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 AC092437.1-201ENST00000624794 1048 ntBASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 TCF3P1-201ENST00000423021 1937 ntBASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms