Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.99■□□□□ 0.31
ALX4Q9H161 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.99■□□□□ 0.31
ALX4Q9H161 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.99■□□□□ 0.31
ALX4Q9H161 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.99■□□□□ 0.31
ALX4Q9H161 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ALX4Q9H161 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.99■□□□□ 0.31
ALX4Q9H161 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ALX4Q9H161 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.98■□□□□ 0.31
ALX4Q9H161 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.98■□□□□ 0.31
ALX4Q9H161 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.98■□□□□ 0.31
ALX4Q9H161 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.98■□□□□ 0.31
ALX4Q9H161 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.98■□□□□ 0.31
ALX4Q9H161 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ALX4Q9H161 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.98■□□□□ 0.31
ALX4Q9H161 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ALX4Q9H161 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 AL138781.2-201ENST00000617896 1843 ntBASIC16.98■□□□□ 0.31
ALX4Q9H161 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ALX4Q9H161 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
ALX4Q9H161 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 AC005082.1-201ENST00000413042 2259 ntBASIC16.97■□□□□ 0.31
ALX4Q9H161 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.97■□□□□ 0.31
ALX4Q9H161 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.97■□□□□ 0.31
ALX4Q9H161 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.97■□□□□ 0.31
ALX4Q9H161 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
ALX4Q9H161 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALX4Q9H161 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ALX4Q9H161 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ALX4Q9H161 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ALX4Q9H161 IGHV3-19-201ENST00000521488 291 ntBASIC16.96■□□□□ 0.31
ALX4Q9H161 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.96■□□□□ 0.31
ALX4Q9H161 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.96■□□□□ 0.31
ALX4Q9H161 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALX4Q9H161 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.96■□□□□ 0.31
ALX4Q9H161 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ALX4Q9H161 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ALX4Q9H161 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ALX4Q9H161 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.95■□□□□ 0.3
ALX4Q9H161 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ALX4Q9H161 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.95■□□□□ 0.3
ALX4Q9H161 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALX4Q9H161 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX4Q9H161 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX4Q9H161 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.95■□□□□ 0.3
ALX4Q9H161 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX4Q9H161 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.95■□□□□ 0.3
ALX4Q9H161 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.95■□□□□ 0.3
ALX4Q9H161 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX4Q9H161 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.95■□□□□ 0.3
ALX4Q9H161 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX4Q9H161 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALX4Q9H161 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms