Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 AC110285.5-201ENST00000611501 352 ntBASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FAM49AQ9H0Q0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 AC023632.3-201ENST00000521633 145 ntBASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 PLK5-205ENST00000642079 1969 ntBASIC22.25■■□□□ 1.15
FAM49AQ9H0Q0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 RPS2P55-201ENST00000397318 883 ntBASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 AC107956.1-201ENST00000494359 873 ntBASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.24■■□□□ 1.15
FAM49AQ9H0Q0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 AC012618.2-201ENST00000428058 849 ntBASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 TSPY7P-201ENST00000431358 1114 ntBASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 PRKY-204ENST00000533551 1019 ntBASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 AC233702.5-201ENST00000584107 538 ntBASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.23■■□□□ 1.15
FAM49AQ9H0Q0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 AL121603.2-201ENST00000557373 2117 ntBASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FAM49AQ9H0Q0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms