Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14□□□□□ -0.17
UPK3BQ9BT76 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
UPK3BQ9BT76 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 FAM201B-201ENST00000458407 597 ntBASIC13.99□□□□□ -0.17
UPK3BQ9BT76 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 AC060766.5-201ENST00000590539 871 ntBASIC13.99□□□□□ -0.17
UPK3BQ9BT76 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UPK3BQ9BT76 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 AL356652.1-201ENST00000615962 565 ntBASIC13.98□□□□□ -0.17
UPK3BQ9BT76 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 AL049796.1-201ENST00000565336 1766 ntBASIC13.98□□□□□ -0.17
UPK3BQ9BT76 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK3BQ9BT76 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 POU5F1P3-201ENST00000428824 1078 ntBASIC13.97□□□□□ -0.17
UPK3BQ9BT76 TSPY20P-201ENST00000450910 630 ntBASIC13.97□□□□□ -0.17
UPK3BQ9BT76 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UPK3BQ9BT76 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK3BQ9BT76 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms