Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
USB1Q9BQ65 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.92■□□□□ 0.46
USB1Q9BQ65 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 AC105020.6-201ENST00000621523 1217 ntBASIC17.92■□□□□ 0.46
USB1Q9BQ65 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
USB1Q9BQ65 KRT17P1-201ENST00000399211 1546 ntBASIC17.92■□□□□ 0.46
USB1Q9BQ65 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USB1Q9BQ65 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USB1Q9BQ65 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.91■□□□□ 0.46
USB1Q9BQ65 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.91■□□□□ 0.46
USB1Q9BQ65 AL355472.2-201ENST00000422958 438 ntBASIC17.91■□□□□ 0.46
USB1Q9BQ65 POU5F1P3-201ENST00000428824 1078 ntBASIC17.91■□□□□ 0.46
USB1Q9BQ65 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.91■□□□□ 0.46
USB1Q9BQ65 AC060766.5-201ENST00000590539 871 ntBASIC17.91■□□□□ 0.46
USB1Q9BQ65 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USB1Q9BQ65 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.91■□□□□ 0.46
USB1Q9BQ65 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 AC011484.1-201ENST00000377652 1995 ntBASIC17.9■□□□□ 0.46
USB1Q9BQ65 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.9■□□□□ 0.46
USB1Q9BQ65 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USB1Q9BQ65 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.9■□□□□ 0.46
USB1Q9BQ65 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.89■□□□□ 0.46
USB1Q9BQ65 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
USB1Q9BQ65 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USB1Q9BQ65 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USB1Q9BQ65 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 TSPY20P-201ENST00000450910 630 ntBASIC17.89■□□□□ 0.45
USB1Q9BQ65 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USB1Q9BQ65 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USB1Q9BQ65 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USB1Q9BQ65 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.88■□□□□ 0.45
USB1Q9BQ65 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.88■□□□□ 0.45
USB1Q9BQ65 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
USB1Q9BQ65 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
USB1Q9BQ65 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
USB1Q9BQ65 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USB1Q9BQ65 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms