Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
CPNE1Q99829 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE1Q99829 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.15■□□□□ 0.82
CPNE1Q99829 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.15■□□□□ 0.82
CPNE1Q99829 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.15■□□□□ 0.82
CPNE1Q99829 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CPNE1Q99829 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.15■□□□□ 0.82
CPNE1Q99829 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CPNE1Q99829 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE1Q99829 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.15■□□□□ 0.82
CPNE1Q99829 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE1Q99829 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CPNE1Q99829 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE1Q99829 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.15■□□□□ 0.82
CPNE1Q99829 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CPNE1Q99829 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE1Q99829 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CPNE1Q99829 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CPNE1Q99829 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE1Q99829 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CPNE1Q99829 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE1Q99829 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.14■□□□□ 0.81
CPNE1Q99829 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE1Q99829 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CPNE1Q99829 TERF1P5-201ENST00000477545 1207 ntBASIC20.14■□□□□ 0.81
CPNE1Q99829 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.14■□□□□ 0.81
CPNE1Q99829 AL591742.1-201ENST00000604433 565 ntBASIC20.14■□□□□ 0.81
CPNE1Q99829 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE1Q99829 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE1Q99829 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CPNE1Q99829 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CPNE1Q99829 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CPNE1Q99829 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CPNE1Q99829 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.13■□□□□ 0.81
CPNE1Q99829 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE1Q99829 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CPNE1Q99829 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CPNE1Q99829 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE1Q99829 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE1Q99829 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE1Q99829 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE1Q99829 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.12■□□□□ 0.81
CPNE1Q99829 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPNE1Q99829 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.12■□□□□ 0.81
CPNE1Q99829 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CPNE1Q99829 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE1Q99829 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.12■□□□□ 0.81
CPNE1Q99829 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 AC010536.3-201ENST00000620306 533 ntBASIC20.12■□□□□ 0.81
CPNE1Q99829 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPNE1Q99829 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE1Q99829 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE1Q99829 CYP21A1P-202ENST00000354927 1481 ntBASIC20.11■□□□□ 0.81
CPNE1Q99829 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms