Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS2Q99743 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS2Q99743 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.68■□□□□ 0.74
NPAS2Q99743 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.68■□□□□ 0.74
NPAS2Q99743 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS2Q99743 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS2Q99743 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS2Q99743 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NPAS2Q99743 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS2Q99743 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS2Q99743 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS2Q99743 EEF1DP3-203ENST00000566025 782 ntBASIC19.67■□□□□ 0.74
NPAS2Q99743 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.67■□□□□ 0.74
NPAS2Q99743 AC138907.5-202ENST00000569484 235 ntBASIC19.67■□□□□ 0.74
NPAS2Q99743 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.67■□□□□ 0.74
NPAS2Q99743 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.67■□□□□ 0.74
NPAS2Q99743 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.67■□□□□ 0.74
NPAS2Q99743 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NPAS2Q99743 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPAS2Q99743 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS2Q99743 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS2Q99743 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.67■□□□□ 0.74
NPAS2Q99743 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NPAS2Q99743 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS2Q99743 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NPAS2Q99743 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPAS2Q99743 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS2Q99743 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.66■□□□□ 0.74
NPAS2Q99743 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 ID1-201ENST00000376105 1233 ntBASIC19.66■□□□□ 0.74
NPAS2Q99743 AC026185.1-201ENST00000445748 174 ntBASIC19.66■□□□□ 0.74
NPAS2Q99743 AC010141.2-201ENST00000452426 721 ntBASIC19.66■□□□□ 0.74
NPAS2Q99743 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS2Q99743 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.66■□□□□ 0.74
NPAS2Q99743 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS2Q99743 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.66■□□□□ 0.74
NPAS2Q99743 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
NPAS2Q99743 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS2Q99743 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS2Q99743 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NPAS2Q99743 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NPAS2Q99743 CROCCP5-201ENST00000436658 830 ntBASIC19.65■□□□□ 0.74
NPAS2Q99743 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS2Q99743 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.65■□□□□ 0.74
NPAS2Q99743 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS2Q99743 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.65■□□□□ 0.74
NPAS2Q99743 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS2Q99743 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NPAS2Q99743 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NPAS2Q99743 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS2Q99743 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS2Q99743 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS2Q99743 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPAS2Q99743 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
NPAS2Q99743 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.64■□□□□ 0.74
NPAS2Q99743 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NPAS2Q99743 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
NPAS2Q99743 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.64■□□□□ 0.74
NPAS2Q99743 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
NPAS2Q99743 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NPAS2Q99743 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NPAS2Q99743 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS2Q99743 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.64■□□□□ 0.73
NPAS2Q99743 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS2Q99743 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS2Q99743 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS2Q99743 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms