Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL12A1Q99715 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.77■□□□□ 0.44
COL12A1Q99715 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL12A1Q99715 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.77■□□□□ 0.43
COL12A1Q99715 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL12A1Q99715 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.77■□□□□ 0.43
COL12A1Q99715 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
COL12A1Q99715 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.76■□□□□ 0.43
COL12A1Q99715 TSPY21P-201ENST00000433481 731 ntBASIC17.76■□□□□ 0.43
COL12A1Q99715 TSPY23P-201ENST00000440136 739 ntBASIC17.76■□□□□ 0.43
COL12A1Q99715 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.76■□□□□ 0.43
COL12A1Q99715 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.76■□□□□ 0.43
COL12A1Q99715 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.76■□□□□ 0.43
COL12A1Q99715 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.76■□□□□ 0.43
COL12A1Q99715 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.76■□□□□ 0.43
COL12A1Q99715 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.76■□□□□ 0.43
COL12A1Q99715 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL12A1Q99715 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL12A1Q99715 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.75■□□□□ 0.43
COL12A1Q99715 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.75■□□□□ 0.43
COL12A1Q99715 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.75■□□□□ 0.43
COL12A1Q99715 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.75■□□□□ 0.43
COL12A1Q99715 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.75■□□□□ 0.43
COL12A1Q99715 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.75■□□□□ 0.43
COL12A1Q99715 AL121956.5-201ENST00000625261 221 ntBASIC17.75■□□□□ 0.43
COL12A1Q99715 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.75■□□□□ 0.43
COL12A1Q99715 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL12A1Q99715 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.75■□□□□ 0.43
COL12A1Q99715 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.75■□□□□ 0.43
COL12A1Q99715 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
COL12A1Q99715 MESTP1-201ENST00000404287 994 ntBASIC17.75■□□□□ 0.43
COL12A1Q99715 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.75■□□□□ 0.43
COL12A1Q99715 PCED1CP-201ENST00000419887 785 ntBASIC17.75■□□□□ 0.43
COL12A1Q99715 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.75■□□□□ 0.43
COL12A1Q99715 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
COL12A1Q99715 AC011558.1-201ENST00000623459 338 ntBASIC17.75■□□□□ 0.43
COL12A1Q99715 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL12A1Q99715 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL12A1Q99715 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL12A1Q99715 KRT17P6-201ENST00000453795 1220 ntBASIC17.74■□□□□ 0.43
COL12A1Q99715 AC004264.1-201ENST00000608354 794 ntBASIC17.74■□□□□ 0.43
COL12A1Q99715 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.74■□□□□ 0.43
COL12A1Q99715 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL12A1Q99715 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COL12A1Q99715 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL12A1Q99715 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.74■□□□□ 0.43
COL12A1Q99715 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL12A1Q99715 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL12A1Q99715 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL12A1Q99715 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL12A1Q99715 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL12A1Q99715 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL12A1Q99715 AL845331.1-201ENST00000424978 1190 ntBASIC17.73■□□□□ 0.43
COL12A1Q99715 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.73■□□□□ 0.43
COL12A1Q99715 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.73■□□□□ 0.43
COL12A1Q99715 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.73■□□□□ 0.43
COL12A1Q99715 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.73■□□□□ 0.43
COL12A1Q99715 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.73■□□□□ 0.43
COL12A1Q99715 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL12A1Q99715 AL359075.1-203ENST00000462729 1002 ntBASIC17.73■□□□□ 0.43
COL12A1Q99715 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.73■□□□□ 0.43
COL12A1Q99715 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.73■□□□□ 0.43
COL12A1Q99715 AC026271.3-201ENST00000571884 352 ntBASIC17.73■□□□□ 0.43
COL12A1Q99715 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.73■□□□□ 0.43
COL12A1Q99715 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL12A1Q99715 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL12A1Q99715 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms