Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH15Q96QU1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PCDH15Q96QU1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH15Q96QU1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PCDH15Q96QU1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 AC023632.3-201ENST00000521633 145 ntBASIC19.79■□□□□ 0.76
PCDH15Q96QU1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 AC073195.1-201ENST00000607241 877 ntBASIC19.79■□□□□ 0.76
PCDH15Q96QU1 AP000525.1-201ENST00000608286 694 ntBASIC19.79■□□□□ 0.76
PCDH15Q96QU1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH15Q96QU1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH15Q96QU1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
PCDH15Q96QU1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.77■□□□□ 0.75
PCDH15Q96QU1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PCDH15Q96QU1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PCDH15Q96QU1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.77■□□□□ 0.75
PCDH15Q96QU1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH15Q96QU1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
PCDH15Q96QU1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 AC012676.1-201ENST00000574705 1949 ntBASIC19.76■□□□□ 0.75
PCDH15Q96QU1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 TERF1P1-201ENST00000311003 1181 ntBASIC19.76■□□□□ 0.75
PCDH15Q96QU1 AC116562.2-201ENST00000507042 360 ntBASIC19.76■□□□□ 0.75
PCDH15Q96QU1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH15Q96QU1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH15Q96QU1 MIR2861-201ENST00000636310 90 ntBASIC19.75■□□□□ 0.75
PCDH15Q96QU1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 FBXW4P1-201ENST00000426721 2239 ntBASIC19.74■□□□□ 0.75
PCDH15Q96QU1 AC073508.3-201ENST00000619697 1419 ntBASIC19.74■□□□□ 0.75
PCDH15Q96QU1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms