Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.67■□□□□ 0.1
DUX3Q96PT4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 AC142381.4-202ENST00000563973 229 ntBASIC15.67■□□□□ 0.1
DUX3Q96PT4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX3Q96PT4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
DUX3Q96PT4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 AC121338.2-201ENST00000622535 1744 ntBASIC15.66■□□□□ 0.1
DUX3Q96PT4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
DUX3Q96PT4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.66■□□□□ 0.1
DUX3Q96PT4 PGM5P4-201ENST00000421970 445 ntBASIC15.66■□□□□ 0.1
DUX3Q96PT4 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.66■□□□□ 0.1
DUX3Q96PT4 UNC93B4-201ENST00000505679 747 ntBASIC15.66■□□□□ 0.1
DUX3Q96PT4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
DUX3Q96PT4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.66■□□□□ 0.1
DUX3Q96PT4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DUX3Q96PT4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.66■□□□□ 0.1
DUX3Q96PT4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 AC233263.1-201ENST00000578059 224 ntBASIC15.65■□□□□ 0.1
DUX3Q96PT4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 AC006557.6-201ENST00000623071 864 ntBASIC15.65■□□□□ 0.1
DUX3Q96PT4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.65■□□□□ 0.1
DUX3Q96PT4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX3Q96PT4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
DUX3Q96PT4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 GCSHP5-201ENST00000443090 522 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms