Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.66■■□□□ 1.06
CASD1Q96PB1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.66■■□□□ 1.06
CASD1Q96PB1 AC026471.5-201ENST00000615068 467 ntBASIC21.66■■□□□ 1.06
CASD1Q96PB1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASD1Q96PB1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASD1Q96PB1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASD1Q96PB1 PTBP1P-201ENST00000554374 1601 ntBASIC21.66■■□□□ 1.06
CASD1Q96PB1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CASD1Q96PB1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.65■■□□□ 1.06
CASD1Q96PB1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CASD1Q96PB1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 AL121906.2-201ENST00000621597 723 ntBASIC21.65■■□□□ 1.06
CASD1Q96PB1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASD1Q96PB1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CASD1Q96PB1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CASD1Q96PB1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CASD1Q96PB1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.64■■□□□ 1.06
CASD1Q96PB1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CASD1Q96PB1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASD1Q96PB1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASD1Q96PB1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 MIR1224-201ENST00000408193 85 ntBASIC21.64■■□□□ 1.05
CASD1Q96PB1 KRT18P21-201ENST00000515767 1272 ntBASIC21.64■■□□□ 1.05
CASD1Q96PB1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 AP003071.4-201ENST00000562276 1284 ntBASIC21.64■■□□□ 1.05
CASD1Q96PB1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 AC012306.2-201ENST00000609350 630 ntBASIC21.64■■□□□ 1.05
CASD1Q96PB1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.64■■□□□ 1.05
CASD1Q96PB1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASD1Q96PB1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASD1Q96PB1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CASD1Q96PB1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.63■■□□□ 1.05
CASD1Q96PB1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CASD1Q96PB1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.63■■□□□ 1.05
CASD1Q96PB1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CASD1Q96PB1 CD177P1-201ENST00000606252 935 ntBASIC21.63■■□□□ 1.05
CASD1Q96PB1 AC097493.4-201ENST00000641197 219 ntBASIC21.63■■□□□ 1.05
CASD1Q96PB1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CASD1Q96PB1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.63■■□□□ 1.05
CASD1Q96PB1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.63■■□□□ 1.05
CASD1Q96PB1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 AL353708.3-201ENST00000610272 989 ntBASIC21.62■■□□□ 1.05
CASD1Q96PB1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CASD1Q96PB1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CASD1Q96PB1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CASD1Q96PB1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CASD1Q96PB1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CASD1Q96PB1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CASD1Q96PB1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 FAM197Y1-201ENST00000421178 764 ntBASIC21.61■■□□□ 1.05
CASD1Q96PB1 AL353807.1-201ENST00000427475 662 ntBASIC21.61■■□□□ 1.05
CASD1Q96PB1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CASD1Q96PB1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CASD1Q96PB1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.61■■□□□ 1.05
CASD1Q96PB1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms