Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.81■■□□□ 1.08
SNX27Q96L92 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SNX27Q96L92 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.81■■□□□ 1.08
SNX27Q96L92 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.81■■□□□ 1.08
SNX27Q96L92 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.81■■□□□ 1.08
SNX27Q96L92 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.81■■□□□ 1.08
SNX27Q96L92 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.81■■□□□ 1.08
SNX27Q96L92 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.81■■□□□ 1.08
SNX27Q96L92 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.81■■□□□ 1.08
SNX27Q96L92 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SNX27Q96L92 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.81■■□□□ 1.08
SNX27Q96L92 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX27Q96L92 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.81■■□□□ 1.08
SNX27Q96L92 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
SNX27Q96L92 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX27Q96L92 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX27Q96L92 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SNX27Q96L92 AC142381.4-202ENST00000563973 229 ntBASIC21.8■■□□□ 1.08
SNX27Q96L92 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 AL445228.2-201ENST00000605589 952 ntBASIC21.8■■□□□ 1.08
SNX27Q96L92 AC120498.8-201ENST00000614275 531 ntBASIC21.8■■□□□ 1.08
SNX27Q96L92 REXO1L12P-201ENST00000622156 912 ntBASIC21.8■■□□□ 1.08
SNX27Q96L92 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX27Q96L92 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SNX27Q96L92 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX27Q96L92 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX27Q96L92 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX27Q96L92 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX27Q96L92 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX27Q96L92 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX27Q96L92 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX27Q96L92 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX27Q96L92 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX27Q96L92 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX27Q96L92 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX27Q96L92 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX27Q96L92 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
SNX27Q96L92 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX27Q96L92 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX27Q96L92 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX27Q96L92 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SNX27Q96L92 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX27Q96L92 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SNX27Q96L92 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX27Q96L92 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX27Q96L92 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX27Q96L92 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
SNX27Q96L92 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SNX27Q96L92 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX27Q96L92 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX27Q96L92 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX27Q96L92 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX27Q96L92 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SNX27Q96L92 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SNX27Q96L92 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX27Q96L92 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX27Q96L92 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX27Q96L92 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX27Q96L92 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX27Q96L92 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX27Q96L92 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX27Q96L92 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX27Q96L92 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.77■■□□□ 1.07
SNX27Q96L92 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX27Q96L92 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SNX27Q96L92 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX27Q96L92 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
SNX27Q96L92 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.76■■□□□ 1.07
SNX27Q96L92 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms