Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 LINC01960-201ENST00000563759 1884 ntBASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COX4I2Q96KJ9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 AP005435.1-201ENST00000529293 1178 ntBASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 AC105233.4-201ENST00000642045 216 ntBASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 AL049796.1-201ENST00000565336 1766 ntBASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COX4I2Q96KJ9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COX4I2Q96KJ9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 AC010525.1-201ENST00000585559 441 ntBASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COX4I2Q96KJ9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 CROCCP5-201ENST00000436658 830 ntBASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.57■□□□□ 0.56
COX4I2Q96KJ9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 NCF1B-203ENST00000435988 1254 ntBASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 AL499627.2-201ENST00000606283 725 ntBASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 AC066615.1-201ENST00000640911 628 ntBASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COX4I2Q96KJ9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms