Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS50Q96JG6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VPS50Q96JG6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS50Q96JG6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS50Q96JG6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS50Q96JG6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS50Q96JG6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS50Q96JG6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
VPS50Q96JG6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
VPS50Q96JG6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.64■□□□□ 0.74
VPS50Q96JG6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.64■□□□□ 0.73
VPS50Q96JG6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS50Q96JG6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS50Q96JG6 AL162412.1-201ENST00000567129 965 ntBASIC19.64■□□□□ 0.73
VPS50Q96JG6 AC142086.2-201ENST00000569753 217 ntBASIC19.64■□□□□ 0.73
VPS50Q96JG6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 AL050303.2-201ENST00000619798 666 ntBASIC19.64■□□□□ 0.73
VPS50Q96JG6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.64■□□□□ 0.73
VPS50Q96JG6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.64■□□□□ 0.73
VPS50Q96JG6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS50Q96JG6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS50Q96JG6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS50Q96JG6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 AC243732.1-201ENST00000612648 864 ntBASIC19.63■□□□□ 0.73
VPS50Q96JG6 AC133041.1-202ENST00000642053 222 ntBASIC19.63■□□□□ 0.73
VPS50Q96JG6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS50Q96JG6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS50Q96JG6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS50Q96JG6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VPS50Q96JG6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS50Q96JG6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.62■□□□□ 0.73
VPS50Q96JG6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS50Q96JG6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VPS50Q96JG6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 AC138932.1-201ENST00000534164 6830 ntBASIC19.62■□□□□ 0.73
VPS50Q96JG6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS50Q96JG6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS50Q96JG6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VPS50Q96JG6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 PLK5-205ENST00000642079 1969 ntBASIC19.61■□□□□ 0.73
VPS50Q96JG6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS50Q96JG6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS50Q96JG6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS50Q96JG6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS50Q96JG6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VPS50Q96JG6 AL512625.2-201ENST00000417533 625 ntBASIC19.61■□□□□ 0.73
VPS50Q96JG6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 MIR4758-201ENST00000577688 71 ntBASIC19.61■□□□□ 0.73
VPS50Q96JG6 AL591742.1-201ENST00000604433 565 ntBASIC19.61■□□□□ 0.73
VPS50Q96JG6 AC003102.1-202ENST00000563394 1796 ntBASIC19.61■□□□□ 0.73
VPS50Q96JG6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS50Q96JG6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms