Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 BX005040.4-201ENST00000637145 1518 ntBASIC19.81■□□□□ 0.76
SPDL1Q96EA4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.81■□□□□ 0.76
SPDL1Q96EA4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPDL1Q96EA4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 AC005224.4-201ENST00000583262 1652 ntBASIC19.8■□□□□ 0.76
SPDL1Q96EA4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.8■□□□□ 0.76
SPDL1Q96EA4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 AL512408.1-201ENST00000569378 2000 ntBASIC19.79■□□□□ 0.76
SPDL1Q96EA4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPDL1Q96EA4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 AL162377.1-201ENST00000618844 1793 ntBASIC19.78■□□□□ 0.76
SPDL1Q96EA4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPDL1Q96EA4 AC020916.1-201ENST00000587762 1774 ntBASIC19.78■□□□□ 0.76
SPDL1Q96EA4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.77■□□□□ 0.76
SPDL1Q96EA4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SPDL1Q96EA4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPDL1Q96EA4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPDL1Q96EA4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.76■□□□□ 0.75
SPDL1Q96EA4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 AC112907.3-201ENST00000577781 2400 ntBASIC19.76■□□□□ 0.75
SPDL1Q96EA4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPDL1Q96EA4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms