Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A3Q93084 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A3Q93084 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A3Q93084 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A3Q93084 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A3Q93084 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATP2A3Q93084 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A3Q93084 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A3Q93084 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A3Q93084 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
ATP2A3Q93084 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A3Q93084 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 KRT17P3-201ENST00000420566 1262 ntBASIC21.17■□□□□ 0.98
ATP2A3Q93084 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.17■□□□□ 0.98
ATP2A3Q93084 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A3Q93084 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A3Q93084 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2A3Q93084 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A3Q93084 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A3Q93084 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ATP2A3Q93084 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP2A3Q93084 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP2A3Q93084 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP2A3Q93084 PGM5P4-201ENST00000421970 445 ntBASIC21.16■□□□□ 0.98
ATP2A3Q93084 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP2A3Q93084 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
ATP2A3Q93084 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ATP2A3Q93084 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A3Q93084 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 AC087633.2-202ENST00000565166 1439 ntBASIC21.15■□□□□ 0.98
ATP2A3Q93084 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 SOX15-203ENST00000570788 1093 ntBASIC21.15■□□□□ 0.98
ATP2A3Q93084 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 LINC01521-201ENST00000504184 1943 ntBASIC21.15■□□□□ 0.98
ATP2A3Q93084 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A3Q93084 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A3Q93084 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms