Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC1Q92922 CYP2D8P-201ENST00000433633 1490 ntBASIC25.94■■□□□ 1.74
SMARCC1Q92922 TERF1P1-201ENST00000311003 1181 ntBASIC25.94■■□□□ 1.74
SMARCC1Q92922 NIFKP9-201ENST00000419265 221 ntBASIC25.94■■□□□ 1.74
SMARCC1Q92922 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 AL137013.1-201ENST00000432946 1228 ntBASIC25.94■■□□□ 1.74
SMARCC1Q92922 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 AC010947.1-201ENST00000623454 693 ntBASIC25.94■■□□□ 1.74
SMARCC1Q92922 CR392000.1-201ENST00000624770 1228 ntBASIC25.94■■□□□ 1.74
SMARCC1Q92922 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC1Q92922 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC1Q92922 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC1Q92922 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC1Q92922 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC1Q92922 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.93■■□□□ 1.74
SMARCC1Q92922 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC1Q92922 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
SMARCC1Q92922 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.93■■□□□ 1.74
SMARCC1Q92922 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.93■■□□□ 1.74
SMARCC1Q92922 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.93■■□□□ 1.74
SMARCC1Q92922 AC073508.3-201ENST00000619697 1419 ntBASIC25.93■■□□□ 1.74
SMARCC1Q92922 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC1Q92922 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
SMARCC1Q92922 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.92■■□□□ 1.74
SMARCC1Q92922 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.92■■□□□ 1.74
SMARCC1Q92922 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.92■■□□□ 1.74
SMARCC1Q92922 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 AL390955.1-201ENST00000428694 934 ntBASIC25.92■■□□□ 1.74
SMARCC1Q92922 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.92■■□□□ 1.74
SMARCC1Q92922 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.92■■□□□ 1.74
SMARCC1Q92922 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.92■■□□□ 1.74
SMARCC1Q92922 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
SMARCC1Q92922 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC1Q92922 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.91■■□□□ 1.74
SMARCC1Q92922 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC1Q92922 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.91■■□□□ 1.74
SMARCC1Q92922 KRT16P1-201ENST00000399124 1418 ntBASIC25.91■■□□□ 1.74
SMARCC1Q92922 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC1Q92922 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC1Q92922 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.91■■□□□ 1.74
SMARCC1Q92922 SLC25A3P1-201ENST00000443844 931 ntBASIC25.91■■□□□ 1.74
SMARCC1Q92922 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC1Q92922 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC1Q92922 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.91■■□□□ 1.74
SMARCC1Q92922 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.91■■□□□ 1.74
SMARCC1Q92922 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC1Q92922 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SMARCC1Q92922 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.9■■□□□ 1.74
SMARCC1Q92922 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
SMARCC1Q92922 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
SMARCC1Q92922 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.9■■□□□ 1.74
SMARCC1Q92922 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
SMARCC1Q92922 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 HLA-G-202ENST00000376815 851 ntBASIC25.9■■□□□ 1.74
SMARCC1Q92922 HLA-G-203ENST00000376818 1127 ntBASIC25.9■■□□□ 1.74
SMARCC1Q92922 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC1Q92922 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.9■■□□□ 1.74
SMARCC1Q92922 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.9■■□□□ 1.74
SMARCC1Q92922 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMARCC1Q92922 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMARCC1Q92922 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
SMARCC1Q92922 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.89■■□□□ 1.74
SMARCC1Q92922 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SMARCC1Q92922 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.89■■□□□ 1.74
SMARCC1Q92922 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
SMARCC1Q92922 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.89■■□□□ 1.74
SMARCC1Q92922 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.89■■□□□ 1.74
SMARCC1Q92922 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMARCC1Q92922 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
SMARCC1Q92922 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SMARCC1Q92922 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
SMARCC1Q92922 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
SMARCC1Q92922 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SMARCC1Q92922 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC1Q92922 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC1Q92922 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms