Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.64■□□□□ 0.42
RPS4Y2Q8TD47 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.64■□□□□ 0.42
RPS4Y2Q8TD47 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 TNXA-203ENST00000507684 2038 ntBASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 AC027612.3-201ENST00000413684 1047 ntBASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 SLC7A5P1-201ENST00000568957 537 ntBASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 AC093484.2-201ENST00000580996 2166 ntBASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4Y2Q8TD47 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 AC104187.1-201ENST00000607510 612 ntBASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 FAM21FP-204ENST00000608637 956 ntBASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4Y2Q8TD47 AP000974.1-201ENST00000623909 2387 ntBASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.62■□□□□ 0.41
RPS4Y2Q8TD47 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4Y2Q8TD47 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms