Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 SLC25A1P4-201ENST00000567977 778 ntBASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 AP002982.1-201ENST00000492365 877 ntBASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 AC091076.1-201ENST00000610741 619 ntBASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
ALMS1Q8TCU4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 AL358472.4-201ENST00000633140 710 ntBASIC13.71□□□□□ -0.22
ALMS1Q8TCU4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 AC130371.2-201ENST00000619443 611 ntBASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 AL138966.2-201ENST00000621997 464 ntBASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 CLEC4GP1-201ENST00000596555 870 ntBASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
ALMS1Q8TCU4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 AL121956.5-201ENST00000625261 221 ntBASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ALMS1Q8TCU4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALMS1Q8TCU4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALMS1Q8TCU4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms