Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 PGM5P4-201ENST00000421970 445 ntBASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 MIR2861-201ENST00000636310 90 ntBASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 MKRN4P-201ENST00000444706 1521 ntBASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLL1Q8TB92 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLL1Q8TB92 TCF3P1-201ENST00000423021 1937 ntBASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 ID1-201ENST00000376105 1233 ntBASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGCLL1Q8TB92 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 KRT18P68-201ENST00000392293 1000 ntBASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 AC104771.1-201ENST00000603335 964 ntBASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 AL109923.1-201ENST00000618799 583 ntBASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCLL1Q8TB92 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HMGCLL1Q8TB92 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.77■□□□□ 0.75
HMGCLL1Q8TB92 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HMGCLL1Q8TB92 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.77■□□□□ 0.75
HMGCLL1Q8TB92 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms