Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 AC128676.1-201ENST00000454392 318 ntBASIC21.72■■□□□ 1.07
BEST2Q8NFU1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
BEST2Q8NFU1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST2Q8NFU1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 KRT17P3-201ENST00000420566 1262 ntBASIC21.71■■□□□ 1.07
BEST2Q8NFU1 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.71■■□□□ 1.07
BEST2Q8NFU1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.71■■□□□ 1.07
BEST2Q8NFU1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
BEST2Q8NFU1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 GCSHP5-201ENST00000443090 522 ntBASIC21.7■■□□□ 1.06
BEST2Q8NFU1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 AC073648.6-201ENST00000641589 218 ntBASIC21.7■■□□□ 1.06
BEST2Q8NFU1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST2Q8NFU1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.69■■□□□ 1.06
BEST2Q8NFU1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 HLA-G-202ENST00000376815 851 ntBASIC21.68■■□□□ 1.06
BEST2Q8NFU1 HLA-G-203ENST00000376818 1127 ntBASIC21.68■■□□□ 1.06
BEST2Q8NFU1 POM121L13P-201ENST00000422362 380 ntBASIC21.68■■□□□ 1.06
BEST2Q8NFU1 RPS2P52-201ENST00000469610 820 ntBASIC21.68■■□□□ 1.06
BEST2Q8NFU1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 AC120498.8-201ENST00000614275 531 ntBASIC21.68■■□□□ 1.06
BEST2Q8NFU1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
BEST2Q8NFU1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms