Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 AL135905.2-201ENST00000584934 1404 ntBASIC24.96■■□□□ 1.59
RTL9Q8NET4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RTL9Q8NET4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTL9Q8NET4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTL9Q8NET4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTL9Q8NET4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.95■■□□□ 1.59
RTL9Q8NET4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTL9Q8NET4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.59
RTL9Q8NET4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
RTL9Q8NET4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RTL9Q8NET4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTL9Q8NET4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTL9Q8NET4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTL9Q8NET4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTL9Q8NET4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTL9Q8NET4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.95■■□□□ 1.58
RTL9Q8NET4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTL9Q8NET4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.95■■□□□ 1.58
RTL9Q8NET4 PLK5-205ENST00000642079 1969 ntBASIC24.94■■□□□ 1.58
RTL9Q8NET4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTL9Q8NET4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RTL9Q8NET4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 LINC01023-201ENST00000606054 436 ntBASIC24.94■■□□□ 1.58
RTL9Q8NET4 AL049637.2-201ENST00000641778 930 ntBASIC24.94■■□□□ 1.58
RTL9Q8NET4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTL9Q8NET4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTL9Q8NET4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTL9Q8NET4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RTL9Q8NET4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTL9Q8NET4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RTL9Q8NET4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTL9Q8NET4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 TSPY15P-201ENST00000457163 923 ntBASIC24.93■■□□□ 1.58
RTL9Q8NET4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 PRKY-204ENST00000533551 1019 ntBASIC24.93■■□□□ 1.58
RTL9Q8NET4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.93■■□□□ 1.58
RTL9Q8NET4 AL121906.2-201ENST00000621597 723 ntBASIC24.93■■□□□ 1.58
RTL9Q8NET4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
RTL9Q8NET4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RTL9Q8NET4 AC124283.5-201ENST00000624661 1809 ntBASIC24.92■■□□□ 1.58
RTL9Q8NET4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.92■■□□□ 1.58
RTL9Q8NET4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTL9Q8NET4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.92■■□□□ 1.58
RTL9Q8NET4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RTL9Q8NET4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.92■■□□□ 1.58
RTL9Q8NET4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC24.92■■□□□ 1.58
RTL9Q8NET4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.92■■□□□ 1.58
RTL9Q8NET4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RTL9Q8NET4 AC010331.1-201ENST00000611423 582 ntBASIC24.92■■□□□ 1.58
RTL9Q8NET4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTL9Q8NET4 AL121603.2-201ENST00000557373 2117 ntBASIC24.91■■□□□ 1.58
RTL9Q8NET4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTL9Q8NET4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RTL9Q8NET4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RTL9Q8NET4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.91■■□□□ 1.58
RTL9Q8NET4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC24.91■■□□□ 1.58
RTL9Q8NET4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.91■■□□□ 1.58
RTL9Q8NET4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTL9Q8NET4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.91■■□□□ 1.58
RTL9Q8NET4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.91■■□□□ 1.58
RTL9Q8NET4 AL031963.3-201ENST00000606441 850 ntBASIC24.91■■□□□ 1.58
RTL9Q8NET4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.91■■□□□ 1.58
RTL9Q8NET4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTL9Q8NET4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms