Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 CNN2P6-201ENST00000439038 900 ntBASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 AL512408.1-201ENST00000569378 2000 ntBASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF439Q8NDP4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 AC016405.3-201ENST00000607710 860 ntBASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 AC011767.1-201ENST00000617410 1153 ntBASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF439Q8NDP4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF439Q8NDP4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms