Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21■□□□□ 0.95
ATP11CQ8NB49 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP11CQ8NB49 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 AC069152.1-201ENST00000438030 544 ntBASIC20.99■□□□□ 0.95
ATP11CQ8NB49 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 AC133041.1-202ENST00000642053 222 ntBASIC20.99■□□□□ 0.95
ATP11CQ8NB49 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.99■□□□□ 0.95
ATP11CQ8NB49 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP11CQ8NB49 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP11CQ8NB49 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 AC098934.4-201ENST00000564127 592 ntBASIC20.97■□□□□ 0.95
ATP11CQ8NB49 AC100791.3-201ENST00000617619 330 ntBASIC20.97■□□□□ 0.95
ATP11CQ8NB49 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 AC011484.1-201ENST00000377652 1995 ntBASIC20.97■□□□□ 0.95
ATP11CQ8NB49 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP11CQ8NB49 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 AL355472.2-201ENST00000422958 438 ntBASIC20.96■□□□□ 0.95
ATP11CQ8NB49 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.96■□□□□ 0.95
ATP11CQ8NB49 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP11CQ8NB49 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ATP11CQ8NB49 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 AL162377.1-201ENST00000618844 1793 ntBASIC20.95■□□□□ 0.94
ATP11CQ8NB49 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 PCDHAC2-203ENST00000615316 3011 ntBASIC20.95■□□□□ 0.94
ATP11CQ8NB49 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 LSM12P1-201ENST00000411836 588 ntBASIC20.95■□□□□ 0.94
ATP11CQ8NB49 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 AC073210.2-201ENST00000430369 194 ntBASIC20.95■□□□□ 0.94
ATP11CQ8NB49 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 AC092118.2-201ENST00000613495 667 ntBASIC20.95■□□□□ 0.94
ATP11CQ8NB49 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP11CQ8NB49 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms