Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 BX276092.2-201ENST00000417668 665 ntBASIC16.37■□□□□ 0.21
LINC00311Q8N616 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 AC023632.3-201ENST00000521633 145 ntBASIC16.37■□□□□ 0.21
LINC00311Q8N616 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 AL031963.3-201ENST00000606441 850 ntBASIC16.37■□□□□ 0.21
LINC00311Q8N616 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC00311Q8N616 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00311Q8N616 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 GPX1P1-201ENST00000388829 606 ntBASIC16.36■□□□□ 0.21
LINC00311Q8N616 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 KRT8P20-201ENST00000423953 1409 ntBASIC16.36■□□□□ 0.21
LINC00311Q8N616 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00311Q8N616 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LINC00311Q8N616 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 HLA-G-202ENST00000376815 851 ntBASIC16.35■□□□□ 0.21
LINC00311Q8N616 HLA-G-203ENST00000376818 1127 ntBASIC16.35■□□□□ 0.21
LINC00311Q8N616 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 MIPEPP3-201ENST00000412105 444 ntBASIC16.35■□□□□ 0.21
LINC00311Q8N616 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.35■□□□□ 0.21
LINC00311Q8N616 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 AC092118.2-201ENST00000613495 667 ntBASIC16.35■□□□□ 0.21
LINC00311Q8N616 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 TCF3P1-201ENST00000423021 1937 ntBASIC16.35■□□□□ 0.21
LINC00311Q8N616 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LINC00311Q8N616 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00311Q8N616 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LINC00311Q8N616 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 SLC29A4P1-201ENST00000398760 971 ntBASIC16.34■□□□□ 0.21
LINC00311Q8N616 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LINC00311Q8N616 GUSBP6-202ENST00000438529 1198 ntBASIC16.34■□□□□ 0.21
LINC00311Q8N616 TSPY6P-201ENST00000448518 926 ntBASIC16.34■□□□□ 0.21
LINC00311Q8N616 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC00311Q8N616 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC00311Q8N616 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC00311Q8N616 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LINC00311Q8N616 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00311Q8N616 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms