Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.4■■□□□ 1.18
DHX40Q8IX18 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.4■■□□□ 1.18
DHX40Q8IX18 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4L2-201ENST00000561772 1275 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 AC104187.1-201ENST00000607510 612 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4L6-201ENST00000626483 1275 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4L1-201ENST00000627662 1275 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4L8-201ENST00000629013 1275 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4L3-201ENST00000630187 1275 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4L7-201ENST00000630678 1275 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 DUX4L5-201ENST00000630834 1275 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
DHX40Q8IX18 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DHX40Q8IX18 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
DHX40Q8IX18 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.4■■□□□ 1.18
DHX40Q8IX18 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
DHX40Q8IX18 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
DHX40Q8IX18 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
DHX40Q8IX18 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.39■■□□□ 1.18
DHX40Q8IX18 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
DHX40Q8IX18 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
DHX40Q8IX18 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.39■■□□□ 1.17
DHX40Q8IX18 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DHX40Q8IX18 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DHX40Q8IX18 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
DHX40Q8IX18 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.39■■□□□ 1.17
DHX40Q8IX18 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.39■■□□□ 1.17
DHX40Q8IX18 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.39■■□□□ 1.17
DHX40Q8IX18 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DHX40Q8IX18 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
DHX40Q8IX18 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DHX40Q8IX18 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.39■■□□□ 1.17
DHX40Q8IX18 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DHX40Q8IX18 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DHX40Q8IX18 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DHX40Q8IX18 AP001160.3-201ENST00000601484 763 ntBASIC22.38■■□□□ 1.17
DHX40Q8IX18 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DHX40Q8IX18 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DHX40Q8IX18 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 AC004408.2-201ENST00000623613 2777 ntBASIC22.38■■□□□ 1.17
DHX40Q8IX18 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.38■■□□□ 1.17
DHX40Q8IX18 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
DHX40Q8IX18 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.37■■□□□ 1.17
DHX40Q8IX18 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.37■■□□□ 1.17
DHX40Q8IX18 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.37■■□□□ 1.17
DHX40Q8IX18 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.37■■□□□ 1.17
DHX40Q8IX18 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.37■■□□□ 1.17
DHX40Q8IX18 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DHX40Q8IX18 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.36■■□□□ 1.17
DHX40Q8IX18 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.36■■□□□ 1.17
DHX40Q8IX18 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
DHX40Q8IX18 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 AC007322.3-201ENST00000426526 701 ntBASIC22.36■■□□□ 1.17
DHX40Q8IX18 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.36■■□□□ 1.17
DHX40Q8IX18 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.36■■□□□ 1.17
DHX40Q8IX18 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.36■■□□□ 1.17
DHX40Q8IX18 AC243732.1-201ENST00000612648 864 ntBASIC22.36■■□□□ 1.17
DHX40Q8IX18 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 RBM17P2-201ENST00000616397 1405 ntBASIC22.36■■□□□ 1.17
DHX40Q8IX18 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms