Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 AL121829.2-201ENST00000620908 328 ntBASIC14.13□□□□□ -0.15
CSMD3Q7Z407 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 AC026271.3-201ENST00000571884 352 ntBASIC14.13□□□□□ -0.15
CSMD3Q7Z407 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.13□□□□□ -0.15
CSMD3Q7Z407 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 MIR1238-201ENST00000408483 83 ntBASIC14.12□□□□□ -0.15
CSMD3Q7Z407 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 ECEL1P2-202ENST00000465689 757 ntBASIC14.12□□□□□ -0.15
CSMD3Q7Z407 AC004264.1-201ENST00000608354 794 ntBASIC14.12□□□□□ -0.15
CSMD3Q7Z407 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 KRT18P48-201ENST00000434763 852 ntBASIC14.12□□□□□ -0.15
CSMD3Q7Z407 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 MESTP1-201ENST00000404287 994 ntBASIC14.12□□□□□ -0.15
CSMD3Q7Z407 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.12□□□□□ -0.15
CSMD3Q7Z407 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 KRT126P-201ENST00000549467 1181 ntBASIC14.11□□□□□ -0.15
CSMD3Q7Z407 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.11□□□□□ -0.15
CSMD3Q7Z407 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 NIFKP9-201ENST00000419265 221 ntBASIC14.11□□□□□ -0.15
CSMD3Q7Z407 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD3Q7Z407 AC127496.7-201ENST00000625110 1798 ntBASIC14.11□□□□□ -0.15
CSMD3Q7Z407 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 FAM8A6P-201ENST00000407496 1135 ntBASIC14.1□□□□□ -0.15
CSMD3Q7Z407 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms