Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 AP002982.1-201ENST00000492365 877 ntBASIC10.87□□□□□ -0.67
RNF213Q63HN8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 SLC25A1P2-201ENST00000430693 912 ntBASIC10.87□□□□□ -0.67
RNF213Q63HN8 PPP1R14BP5-201ENST00000440334 435 ntBASIC10.87□□□□□ -0.67
RNF213Q63HN8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 AF228730.7-201ENST00000641842 219 ntBASIC10.87□□□□□ -0.67
RNF213Q63HN8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RNF213Q63HN8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RNF213Q63HN8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 HLA-A-201ENST00000376802 1334 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 KRT18P1-202ENST00000452408 1331 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 PRSS44-201ENST00000515154 1146 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 IFNL4P1-201ENST00000607083 540 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 AL691403.2-201ENST00000618460 490 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 AC138932.3-201ENST00000567634 1902 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 ABBA01031674.1-201ENST00000635145 728 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC10.86□□□□□ -0.67
RNF213Q63HN8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 AL390719.2-201ENST00000606993 987 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 AC112497.1-201ENST00000624824 639 ntBASIC10.86□□□□□ -0.67
RNF213Q63HN8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RNF213Q63HN8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 CALY-203ENST00000368558 825 ntTSL 5 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms