Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 AC113347.1-201ENST00000413321 391 ntBASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 AC027702.1-201ENST00000563810 1770 ntBASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.89■□□□□ 0.77
LYSMD4Q5XG99 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 NAPSB-206ENST00000562112 1266 ntBASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD4Q5XG99 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 MIR2861-201ENST00000636310 90 ntBASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD4Q5XG99 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 HLA-G-202ENST00000376815 851 ntBASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 HLA-G-203ENST00000376818 1127 ntBASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 KRT18P57-201ENST00000443599 1254 ntBASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 CR392000.1-201ENST00000624770 1228 ntBASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD4Q5XG99 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 KRT18P22-201ENST00000402024 1347 ntBASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD4Q5XG99 GUSBP5-202ENST00000510805 1989 ntBASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms