Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 AC011506.1-201ENST00000474329 610 ntBASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 AL390719.2-201ENST00000606993 987 ntBASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 HLA-A-201ENST00000376802 1334 ntBASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.99■■□□□ 1.27
COL13A1Q5TAT6 LINC01960-201ENST00000563759 1884 ntBASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 AC112907.2-201ENST00000448639 330 ntBASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 HLA-J-203ENST00000494367 1087 ntBASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 AL732292.2-201ENST00000609649 430 ntBASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 KRT18P1-202ENST00000452408 1331 ntBASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.98■■□□□ 1.27
COL13A1Q5TAT6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 AC005104.2-201ENST00000427818 678 ntBASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL13A1Q5TAT6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 AL691403.2-201ENST00000618460 490 ntBASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
COL13A1Q5TAT6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
COL13A1Q5TAT6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 HTR5BP-201ENST00000430851 1154 ntBASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 AC239800.4-201ENST00000603712 296 ntBASIC22.95■■□□□ 1.26
COL13A1Q5TAT6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 NUS1P1-201ENST00000446295 882 ntBASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.94■■□□□ 1.26
COL13A1Q5TAT6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 AC007663.1-201ENST00000438948 1240 ntBASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 CCR12P-201ENST00000446203 998 ntBASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms