Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 TERF1P5-201ENST00000477545 1207 ntBASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 AC112907.3-201ENST00000577781 2400 ntBASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCGF3Q3KNV8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCGF3Q3KNV8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 AC061975.6-201ENST00000579045 1553 ntBASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 AC007322.4-201ENST00000509611 723 ntBASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.79■□□□□ 0.44
PCGF3Q3KNV8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 AC243732.1-201ENST00000612648 864 ntBASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCGF3Q3KNV8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 AC138932.1-201ENST00000534164 6830 ntBASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 MIR663A-201ENST00000385250 93 ntBASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 AC005181.1-201ENST00000604782 1256 ntBASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 AC121338.2-201ENST00000622535 1744 ntBASIC17.77■□□□□ 0.44
PCGF3Q3KNV8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PCGF3Q3KNV8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
PCGF3Q3KNV8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCGF3Q3KNV8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCGF3Q3KNV8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms