Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-BQ31612 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-BQ31612 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-BQ31612 AP000525.1-201ENST00000608286 694 ntBASIC19.68■□□□□ 0.74
HLA-BQ31612 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-BQ31612 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-BQ31612 AC233723.2-201ENST00000623798 2106 ntBASIC19.68■□□□□ 0.74
HLA-BQ31612 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-BQ31612 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HLA-BQ31612 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-BQ31612 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-BQ31612 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-BQ31612 KRT8P9-201ENST00000558927 1449 ntBASIC19.68■□□□□ 0.74
HLA-BQ31612 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-BQ31612 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HLA-BQ31612 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
HLA-BQ31612 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
HLA-BQ31612 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.67■□□□□ 0.74
HLA-BQ31612 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-BQ31612 AL590326.2-201ENST00000625139 305 ntBASIC19.67■□□□□ 0.74
HLA-BQ31612 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-BQ31612 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-BQ31612 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-BQ31612 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-BQ31612 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-BQ31612 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-BQ31612 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HLA-BQ31612 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-BQ31612 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-BQ31612 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-BQ31612 MIR1238-201ENST00000408483 83 ntBASIC19.66■□□□□ 0.74
HLA-BQ31612 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-BQ31612 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-BQ31612 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-BQ31612 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-BQ31612 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-BQ31612 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-BQ31612 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HLA-BQ31612 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-BQ31612 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-BQ31612 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-BQ31612 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-BQ31612 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-BQ31612 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-BQ31612 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.65■□□□□ 0.74
HLA-BQ31612 AL031963.3-201ENST00000606441 850 ntBASIC19.65■□□□□ 0.74
HLA-BQ31612 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.65■□□□□ 0.74
HLA-BQ31612 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-BQ31612 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HLA-BQ31612 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-BQ31612 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-BQ31612 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HLA-BQ31612 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-BQ31612 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-BQ31612 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HLA-BQ31612 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-BQ31612 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-BQ31612 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
HLA-BQ31612 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-BQ31612 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 AC005521.1-201ENST00000393351 872 ntBASIC19.64■□□□□ 0.73
HLA-BQ31612 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-BQ31612 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.64■□□□□ 0.73
HLA-BQ31612 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-BQ31612 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-BQ31612 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-BQ31612 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-BQ31612 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-BQ31612 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-BQ31612 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-BQ31612 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-BQ31612 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-BQ31612 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-BQ31612 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HLA-BQ31612 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-BQ31612 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-BQ31612 LINC01568-207ENST00000641790 1380 ntBASIC19.63■□□□□ 0.73
HLA-BQ31612 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-BQ31612 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-BQ31612 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.63■□□□□ 0.73
HLA-BQ31612 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-BQ31612 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms