Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CD47Q08722 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD47Q08722 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CD47Q08722 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.69■□□□□ 0.58
CD47Q08722 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CD47Q08722 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CD47Q08722 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CD47Q08722 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.68■□□□□ 0.58
CD47Q08722 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 AC079140.4-201ENST00000507448 529 ntBASIC18.68■□□□□ 0.58
CD47Q08722 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.68■□□□□ 0.58
CD47Q08722 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD47Q08722 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD47Q08722 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.68■□□□□ 0.58
CD47Q08722 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CD47Q08722 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CD47Q08722 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CD47Q08722 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.67■□□□□ 0.58
CD47Q08722 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.67■□□□□ 0.58
CD47Q08722 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.67■□□□□ 0.58
CD47Q08722 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD47Q08722 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.67■□□□□ 0.58
CD47Q08722 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.66■□□□□ 0.58
CD47Q08722 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CD47Q08722 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.66■□□□□ 0.58
CD47Q08722 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.66■□□□□ 0.58
CD47Q08722 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 AC027612.3-201ENST00000413684 1047 ntBASIC18.66■□□□□ 0.58
CD47Q08722 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.66■□□□□ 0.58
CD47Q08722 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.66■□□□□ 0.58
CD47Q08722 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.66■□□□□ 0.58
CD47Q08722 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.66■□□□□ 0.58
CD47Q08722 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.66■□□□□ 0.58
CD47Q08722 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CD47Q08722 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
CD47Q08722 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD47Q08722 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CD47Q08722 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD47Q08722 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CD47Q08722 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD47Q08722 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD47Q08722 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD47Q08722 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD47Q08722 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.65■□□□□ 0.58
CD47Q08722 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.65■□□□□ 0.58
CD47Q08722 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.65■□□□□ 0.58
CD47Q08722 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.65■□□□□ 0.58
CD47Q08722 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.65■□□□□ 0.58
CD47Q08722 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD47Q08722 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CD47Q08722 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.65■□□□□ 0.58
CD47Q08722 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CD47Q08722 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.65■□□□□ 0.58
CD47Q08722 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CD47Q08722 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD47Q08722 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.64■□□□□ 0.58
CD47Q08722 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CD47Q08722 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD47Q08722 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.64■□□□□ 0.57
CD47Q08722 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.64■□□□□ 0.57
CD47Q08722 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CD47Q08722 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD47Q08722 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD47Q08722 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms